| STRuster results: 102390 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | P-loop containing nucleoside triphosphate hydrolases |
| Superfamily: | P-loop containing nucleoside triphosphate hydrolases |
| Family: | Extended AAA-ATPase domain |
| Protein: | Transcriptional activator sigm54 (NtrC1), C-terminal domain |
| Species: | Aquifex aeolicus |
| Species SCOP sunid: | 102390 |
| Set description |
| Number of entries: | 16 |
| SCOP Entries: | d1ny6j_ d1ny6g_ d1ny6d_ d1ny6l_ d1ny6a_ d1ny6i_ d1ny5b2 d1ny6f_ d1ny6n_ d1ny5a2 d1ny6k_ d1ny6c_ d1ny6h_ d1ny6e_ d1ny6m_ d1ny6b_ |
| Alignment File: | 102390.alig |
| Aligned Sequences: | 102390_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 102390_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 21), (60, 86), (125, 132), (143, 153), (164, 165), (191, 216), (230, 248)] |
| Uniprot Nr | [(137, 158), (197, 223), (262, 269), (280, 290), (301, 302), (328, 353), (367, 385)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(22, 59), (87, 124), (133, 142), (154, 163), (166, 190), (217, 229)] |
| Uniprot Nr | [(159, 196), (224, 261), (270, 279), (291, 300), (303, 327), (354, 366)] |
| Superposition | 102390_superp_1.pdb.gz |
| Rasmol Script | 102390_superp_1.rsm |
| View in Jmol | |
