| STRuster results: 101397 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | A virus capsid protein alpha-helical domain |
| Superfamily: | A virus capsid protein alpha-helical domain |
| Family: | Phytoreovirus capsid |
| Protein: | RDV p8 |
| Species: | Rice dwarf virus |
| Species SCOP sunid: | 101397 |
| Set description |
| Number of entries: | 13 |
| SCOP Entries: | d1uf2i1 d1uf2r1 d1uf2j1 d1uf2g1 d1uf2p1 d1uf2h1 d1uf2e1 d1uf2f1 d1uf2s1 d1uf2c1 d1uf2t1 d1uf2d1 d1uf2q1 |
| Alignment File: | 101397.alig |
| Aligned Sequences: | 101397_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 101397_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(29, 30), (46, 53)] |
| Uniprot Nr | [(30, 31), (47, 54)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 28), (31, 45), (54, 419)] |
| Uniprot Nr | [(1, 29), (32, 46), (55, 420)] |
| Superposition | 101397_superp_1.pdb.gz |
| Rasmol Script | 101397_superp_1.rsm |
| View in Jmol | |
