| STRuster results: 101058 |
| SCOP 1.71 classification |
| Class: | All alpha proteins |
| Fold: | DNA/RNA-binding 3-helical bundle |
| Superfamily: | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| Family: | Sigma4 domain |
| Protein: | Sigma factor sigma-28 (FliA) |
| Species: | Aquifex aeolicus |
| Species SCOP sunid: | 101058 |
| Set description |
| Number of entries: | 5 |
| SCOP Entries: | d1rp3c2 d1rp3a2 d1sc5a2 d1rp3g2 d1rp3e2 |
| Alignment File: | 101058.alig |
| Aligned Sequences: | 101058_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 101058_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(11, 13), (76, 79)] |
| Uniprot Nr | [(168, 170), (233, 236)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 10), (14, 75)] |
| Uniprot Nr | [(157, 167), (171, 232)] |
| Superposition | 101058_superp_1.pdb.gz |
| Rasmol Script | 101058_superp_1.rsm |
| View in Jmol | |
