STRuster

 STRuster results: 90171

 SCOP 1.71 classification
Class: Small proteins
Fold: Cystine-knot cytokines
Superfamily: Cystine-knot cytokines
Family: Transforming growth factor (TGF)-beta
Protein: Activin A (Inhibin beta A)
Species: Human (Homo sapiens)
Species SCOP sunid: 90171

 Set description
Number of entries: 6
SCOP Entries: d1nysd_ d1s4yd_ d1nyub_ d1nysb_ d1s4yb_ d1nyud_
Alignment File: 90171.alig
Aligned Sequences: 90171_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 90171_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 7), (35, 58), (76, 79), (92, 97), (114, 115)]
Uniprot Nr [(311, 318), (346, 369), (387, 390), (403, 408), (425, 426)]

 Invariant Regions
Region1
Alignment Nr[(8, 34), (80, 91), (98, 113)]
Uniprot Nr[(319, 345), (391, 402), (409, 424)]
Superposition90171_superp_1.pdb.gz
Rasmol Script90171_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(59, 75)]
Uniprot Nr[(370, 386)]
Superposition-