STRuster

 STRuster results: 90108

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Voltage-gated potassium channels
Superfamily: Voltage-gated potassium channels
Family: Voltage-gated potassium channels
Protein: Potassium channel KVAP
Species: Archaeon Aeropyrum pernix
Species SCOP sunid: 90108

 Set description
Number of entries: 2
SCOP Entries: d1orsc_ d1orqc_
Alignment File: 90108.alig
Aligned Sequences: 90108_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 90108_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(30, 36), (61, 65), (122, 123)]
Uniprot Nr [(61, 67), (92, 96), (153, 154)]

 Invariant Regions
Region1
Alignment Nr[(37, 60), (124, 222)]
Uniprot Nr[(68, 91), (155, 253)]
Superposition90108_superp_1.pdb.gz
Rasmol Script90108_superp_1.rsm
View in Jmol