STRuster

 STRuster results: 90048

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Pyruvoyl-dependent histidine and arginine decarboxylases
Superfamily: Pyruvoyl-dependent histidine and arginine decarboxylases
Family: Arginine decarboxylase
Protein: Arginine decarboxylase
Species: Archaeon Methanococcus jannaschii
Species SCOP sunid: 90048

 Set description
Number of entries: 18
SCOP Entries: d1n2ma_ d1n2mb_ d1mt1.5 d1mt1.6 d1mt1.2 d1n2me_ d1n13.4 d1n13.5 d1n13.6 d1n13.1 d1n13.2 d1n13.3 d1n2mf_ d1mt1.4 d1mt1.3 d1mt1.1 d1n2mc_ d1n2md_
Alignment File: 90048.alig
Aligned Sequences: 90048_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 90048_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 9), (51, 52)]
Uniprot Nr [(3, 12), (54, 55)]

 Invariant Regions
Region1
Alignment Nr[(10, 50), (53, 167)]
Uniprot Nr[(13, 53), (55, 165)]
Superposition90048_superp_1.pdb.gz
Rasmol Script90048_superp_1.rsm
View in Jmol