STRuster

 STRuster results: 89776

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Ribokinase-like
Superfamily: MurD-like peptide ligases, catalytic domain
Family: MurCDEF
Protein: UDP-N-acetylmuramate-alanine ligase MurC
Species: Haemophilus influenzae
Species SCOP sunid: 89776

 Set description
Number of entries: 8
SCOP Entries: d1p3da3 d1p31a3 d1p3db3 d1gqqa3 d1gqqb3 d1gqya3 d1gqyb3 d1p31b3
Alignment File: 89776.alig
Aligned Sequences: 89776_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89776_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5), (30, 35), (96, 105)]
Uniprot Nr [(107, 111), (134, 138), (196, 204)]

 Invariant Regions
Region1
Alignment Nr[(6, 29), (36, 95), (106, 225)]
Uniprot Nr[(112, 134), (138, 195), (205, 321)]
Superposition89776_superp_1.pdb.gz
Rasmol Script89776_superp_1.rsm
View in Jmol