STRuster

 STRuster results: 89727

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: MurD-like peptide ligases, peptide-binding domain
Superfamily: MurD-like peptide ligases, peptide-binding domain
Family: MurCDEF C-terminal domain
Protein: UDP-N-acetylmuramate-alanine ligase MurC
Species: Haemophilus influenzae
Species SCOP sunid: 89727

 Set description
Number of entries: 8
SCOP Entries: d1p31a2 d1p3db2 d1gqqa2 d1p3da2 d1gqqb2 d1p31b2 d1gqya2 d1gqyb2
Alignment File: 89727.alig
Aligned Sequences: 89727_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89727_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1)]
Uniprot Nr [(322, 323)]

 Invariant Regions
Region1
Alignment Nr[(2, 155)]
Uniprot Nr[(324, 475)]
Superposition89727_superp_1.pdb.gz
Rasmol Script89727_superp_1.rsm
View in Jmol