STRuster

 STRuster results: 89636

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: Synapsin domain
Protein: Synapsin II
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 89636

 Set description
Number of entries: 4
SCOP Entries: d1i7lb1 d1i7la1 d1i7nb1 d1i7na1
Alignment File: 89636.alig
Aligned Sequences: 89636_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89636_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(56, 62)]
Uniprot Nr [(169, 175)]

 Invariant Regions
Region1
Alignment Nr[(0, 55), (63, 101)]
Uniprot Nr[(113, 168), (176, 214)]
Superposition89636_superp_1.pdb.gz
Rasmol Script89636_superp_1.rsm
View in Jmol