STRuster

 STRuster results: 89631

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: alpha/beta knot
Superfamily: alpha/beta knot
Family: tRNA(m1G37)-methyltransferase TrmD
Protein: tRNA(m1G37)-methyltransferase TrmD
Species: Haemophilus influenzae
Species SCOP sunid: 89631

 Set description
Number of entries: 4
SCOP Entries: d1uaka_ d1uama_ d1uaja_ d1uala_
Alignment File: 89631.alig
Aligned Sequences: 89631_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89631_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(166, 170), (229, 235), (253, 259)]
Uniprot Nr [(157, 161), (220, 226), (244, 246)]

 Invariant Regions
Region1
Alignment Nr[(0, 165), (171, 228), (236, 252)]
Uniprot Nr[(0, 156), (162, 219), (227, 243)]
Superposition89631_superp_1.pdb.gz
Rasmol Script89631_superp_1.rsm
View in Jmol