STRuster

 STRuster results: 89483

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: (Trans)glycosidases
Family: Type II chitinase
Protein: Chitinase-3 like protein 1 (GP-39, YKL-40)
Species: Human (Homo sapiens)
Species SCOP sunid: 89483

 Set description
Number of entries: 26
SCOP Entries: d1nwud1 d1nwtb1 d1nwsd1 d1hjva1 d1hjvd1 d1nwra1 d1hjxb1 d1nwub1 d1nwtd1 d1hjvc1 d1nwrb1 d1nwta1 d1hjwa1 d1nwsb1 d1nwuc1 d1nwtc1 d1hjxc1 d1hjwb1 d1nwsa1 d1nwrd1 d1hjxa1 d1nwua1 d1hjvb1 d1nwrc1 d1nwsc1 d1hjxd1
Alignment File: 89483.alig
Aligned Sequences: 89483_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89483_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(188, 190)]
Uniprot Nr [(210, 212)]

 Invariant Regions
Region1
Alignment Nr[(0, 187), (191, 361)]
Uniprot Nr[(22, 209), (213, 383)]
Superposition89483_superp_1.pdb.gz
Rasmol Script89483_superp_1.rsm
View in Jmol