STRuster

 STRuster results: 89464

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: (Trans)glycosidases
Family: Amylase, catalytic domain
Protein: Bacterial alpha-amylase
Species: Archaeon Pyrococcus woesei
Species SCOP sunid: 89464

 Set description
Number of entries: 3
SCOP Entries: d1mwoa2 d1mxga2 d1mxda2
Alignment File: 89464.alig
Aligned Sequences: 89464_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89464_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 360)]
Uniprot Nr[(26, 386)]
Superposition89464_superp_1.pdb.gz
Rasmol Script89464_superp_1.rsm
View in Jmol