STRuster

 STRuster results: 89382

 SCOP 1.71 classification
Class: All beta proteins
Fold: Glycosyl hydrolase domain
Superfamily: Glycosyl hydrolase domain
Family: alpha-Amylases, C-terminal beta-sheet domain
Protein: Bacterial alpha-Amylase
Species: Bacillus sp., ksm-k38
Species SCOP sunid: 89382

 Set description
Number of entries: 6
SCOP Entries: d1ud6a1 d1ud8a1 d1ud5a1 d1ud2a1 d1ud4a1 d1ud3a1
Alignment File: 89382.alig
Aligned Sequences: 89382_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89382_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 89)]
Uniprot Nr[(412, 501)]
Superposition89382_superp_1.pdb.gz
Rasmol Script89382_superp_1.rsm
View in Jmol