STRuster

 STRuster results: 89331

 SCOP 1.71 classification
Class: All beta proteins
Fold: OB-fold
Superfamily: Nucleic acid-binding proteins
Family: DNA ligase/mRNA capping enzyme postcatalytic domain
Protein: mRNA capping enzyme alpha subunit
Species: Yeast (Candida albicans)
Species SCOP sunid: 89331

 Set description
Number of entries: 2
SCOP Entries: d1p16a1 d1p16b1
Alignment File: 89331.alig
Aligned Sequences: 89331_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 89331_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (11, 16), (28, 61), (85, 101), (113, 131), (143, 145)]
Uniprot Nr [(246, 246), (257, 262), (274, 307), (331, 346), (358, 376), (388, 390)]

 Invariant Regions
Region1
Alignment Nr[(1, 10), (17, 27), (62, 84), (102, 112)]
Uniprot Nr[(247, 256), (263, 273), (308, 330), (347, 357)]
Superposition89331_superp_1.pdb.gz
Rasmol Script89331_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(1, 10), (17, 27), (132, 142)]
Uniprot Nr[(247, 256), (263, 273), (377, 387)]
Superposition89331_superp_2.pdb.gz
Rasmol Script89331_superp_2.rsm
View in Jmol