STRuster

 STRuster results: 89153

 SCOP 1.71 classification
Class: All alpha proteins
Fold: L-aspartase-like
Superfamily: L-aspartase-like
Family: L-aspartase/fumarase
Protein: L-aspartate ammonia lyase
Species: Bacillus sp., ym55-1
Species SCOP sunid: 89153

 Set description
Number of entries: 2
SCOP Entries: d1j3ua_ d1j3ub_
Alignment File: 89153.alig
Aligned Sequences: 89153_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 89153_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (313, 316), (416, 418), (431, 447), (459, 461)]
Uniprot Nr [(5, 9), (318, 321), (421, 423), (436, 452), (464, 466)]

 Invariant Regions
Region1
Alignment Nr[(5, 312), (317, 415), (419, 430)]
Uniprot Nr[(10, 317), (322, 420), (424, 435)]
Superposition89153_superp_1.pdb.gz
Rasmol Script89153_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(5, 312), (317, 415), (448, 458)]
Uniprot Nr[(10, 317), (322, 420), (453, 463)]
Superposition89153_superp_2.pdb.gz
Rasmol Script89153_superp_2.rsm
View in Jmol