STRuster

 STRuster results: 89141

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Nuclear receptor ligand-binding domain
Superfamily: Nuclear receptor ligand-binding domain
Family: Nuclear receptor ligand-binding domain
Protein: Glucocorticoid receptor
Species: Human (Homo sapiens)
Species SCOP sunid: 89141

 Set description
Number of entries: 7
SCOP Entries: d1p93c_ d1m2zd_ d1m2za_ d1nhza_ d1p93b_ d1p93a_ d1p93d_
Alignment File: 89141.alig
Aligned Sequences: 89141_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89141_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (91, 95), (180, 187), (212, 224), (236, 254)]
Uniprot Nr [(523, 529), (614, 618), (703, 710), (735, 747), (759, 777)]

 Invariant Regions
Region1
Alignment Nr[(7, 90), (96, 179), (188, 211)]
Uniprot Nr[(530, 613), (619, 702), (711, 734)]
Superposition89141_superp_1.pdb.gz
Rasmol Script89141_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(225, 235)]
Uniprot Nr[(748, 758)]
Superposition89141_superp_2.pdb.gz
Rasmol Script89141_superp_2.rsm
View in Jmol