STRuster

 STRuster results: 89089

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Di-copper centre-containing domain
Superfamily: Di-copper centre-containing domain
Family: Hemocyanin middle domain
Protein: Mollusc hemocyanin
Species: Mollusca (Rapana thomasiana)
Species SCOP sunid: 89089

 Set description
Number of entries: 3
SCOP Entries: d1lnlb1 d1lnlc1 d1lnla1
Alignment File: 89089.alig
Aligned Sequences: 89089_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 89089_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (51, 58), (86, 89), (102, 122), (141, 156), (237, 239), (290, 292)]
Uniprot Nr [(6, 9), (57, 64), (92, 95), (108, 128), (147, 162), (243, 245), (296, 298)]

 Invariant Regions
Region1
Alignment Nr[(4, 50), (59, 85), (90, 101), (123, 140), (157, 236), (240, 289), (293, 306)]
Uniprot Nr[(10, 56), (65, 91), (96, 107), (129, 146), (163, 242), (246, 295), (299, 312)]
Superposition89089_superp_1.pdb.gz
Rasmol Script89089_superp_1.rsm
View in Jmol