STRuster

 STRuster results: 88939

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Globin-like
Superfamily: Globin-like
Family: Phycocyanin-like phycobilisome proteins
Protein: Phycocyanin alpha subunit
Species: Spirulina platensis
Species SCOP sunid: 88939

 Set description
Number of entries: 24
SCOP Entries: d1gh0o_ d1gh0g_ d1gh0w_ d1ha7o_ d1ha7g_ d1gh0i_ d1ha7w_ d1gh0a_ d1gh0q_ d1ha7s_ d1ha7i_ d1ha7a_ d1ha7q_ d1gh0k_ d1gh0c_ d1gh0s_ d1ha7k_ d1ha7c_ d1gh0m_ d1gh0e_ d1gh0u_ d1ha7m_ d1ha7e_ d1ha7u_
Alignment File: 88939.alig
Aligned Sequences: 88939_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88939_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 161)]
Uniprot Nr[(1, 162)]
Superposition88939_superp_1.pdb.gz
Rasmol Script88939_superp_1.rsm
View in Jmol