STRuster

 STRuster results: 88929

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Left-handed superhelix
Superfamily: C-terminal domain of alpha and beta subunits of F1 ATP synthase
Family: C-terminal domain of alpha and beta subunits of F1 ATP synthase
Protein: F1 ATP synthase beta subunit, domain 3
Species: Cow (Bos taurus)
Species SCOP sunid: 88929

 Set description
Number of entries: 33
SCOP Entries: d1efrd1 d1e79f1 d1w0jd1 d1h8ee1 d1h8hd1 d1w0kf1 d1e1qf1 d1nbme1 d1h8ef1 d1w0ke1 d1ohhe1 d1e79d1 d1e1rd1 d1nbmf1 d1h8hf1 d1h8ed1 d1cowe1 d1h8he1 d1e1rf1 d1e1qe1 d1nbmd1 d1cowf1 d1efre1 d1e1re1 d1w0je1 d1efrf1 d1w0jf1 d1cowd1 d1ohhd1 d1w0kd1 d1ohhf1 d1e79e1 d1e1qd1
Alignment File: 88929.alig
Aligned Sequences: 88929_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88929_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(27, 40), (63, 69)]
Uniprot Nr [(435, 448), (471, 477)]

 Invariant Regions
Region1
Alignment Nr[(0, 26), (41, 62), (70, 119)]
Uniprot Nr[(408, 434), (449, 470), (478, 527)]
Superposition88929_superp_1.pdb.gz
Rasmol Script88929_superp_1.rsm
View in Jmol