STRuster

 STRuster results: 88885

 SCOP 1.71 classification
Class: Small proteins
Fold: Cystine-knot cytokines
Superfamily: Cystine-knot cytokines
Family: Neurotrophin
Protein: Neurotrophin 3, NT3
Species: Human (Homo sapiens)
Species SCOP sunid: 88885

 Set description
Number of entries: 2
SCOP Entries: d1nt3a_ d1b8ka_
Alignment File: 88885.alig
Aligned Sequences: 88885_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 88885_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (63, 64)]
Uniprot Nr [(146, 149), (209, 210)]

 Invariant Regions
Region1
Alignment Nr[(4, 62), (65, 107)]
Uniprot Nr[(150, 208), (211, 253)]
Superposition88885_superp_1.pdb.gz
Rasmol Script88885_superp_1.rsm
View in Jmol