STRuster

 STRuster results: 88836

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Transcription factor IIA (TFIIA), alpha-helical domain
Superfamily: Transcription factor IIA (TFIIA), alpha-helical domain
Family: Transcription factor IIA (TFIIA), alpha-helical domain
Protein: Small chain TOA2, N-terminal domain
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 88836

 Set description
Number of entries: 2
SCOP Entries: d1ytfd1 d1nh2d1
Alignment File: 88836.alig
Aligned Sequences: 88836_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 88836_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(23, 29)]
Uniprot Nr [(28, 34)]

 Invariant Regions
Region1
Alignment Nr[(0, 22), (30, 49)]
Uniprot Nr[(5, 27), (35, 54)]
Superposition88836_superp_1.pdb.gz
Rasmol Script88836_superp_1.rsm
View in Jmol