STRuster

 STRuster results: 88765

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Thiamin diphosphate-binding fold (THDP-binding)
Superfamily: Thiamin diphosphate-binding fold (THDP-binding)
Family: TK-like PP module
Protein: Pyruvate dehydrogenase E1 component, PP module
Species: Escherichia coli
Species SCOP sunid: 88765

 Set description
Number of entries: 4
SCOP Entries: d1l8aa1 d1rp7a2 d1l8ab1 d1rp7b2
Alignment File: 88765.alig
Aligned Sequences: 88765_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88765_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(341, 343), (358, 360), (374, 374)]
Uniprot Nr [(397, 399), (414, 416), (430, 430)]

 Invariant Regions
Region1
Alignment Nr[(0, 340), (361, 373), (375, 414)]
Uniprot Nr[(56, 396), (417, 429), (431, 470)]
Superposition88765_superp_1.pdb.gz
Rasmol Script88765_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(344, 357)]
Uniprot Nr[(400, 413)]
Superposition88765_superp_2.pdb.gz
Rasmol Script88765_superp_2.rsm
View in Jmol