STRuster

 STRuster results: 88757

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Thiamin diphosphate-binding fold (THDP-binding)
Superfamily: Thiamin diphosphate-binding fold (THDP-binding)
Family: Pyruvate oxidase and decarboxylase PP module
Protein: Benzoylformate decarboxylase
Species: Pseudomonas putida
Species SCOP sunid: 88757

 Set description
Number of entries: 20
SCOP Entries: d1mczo3 d1mczb3 d1mcza3 d1pi3a3 d1mczj3 d1mcze3 d1mczm3 d1mczp3 d1mczh3 d1mczc3 d1po7a3 d1mczk3 d1mczf3 d1mczn3 d1mczi3 d1q6za3 d1mczd3 d1bfd_3 d1mczl3 d1mczg3
Alignment File: 88757.alig
Aligned Sequences: 88757_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88757_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 183)]
Uniprot Nr[(342, 525)]
Superposition88757_superp_1.pdb.gz
Rasmol Script88757_superp_1.rsm
View in Jmol