STRuster

 STRuster results: 88732

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Thiamin diphosphate-binding fold (THDP-binding)
Superfamily: Thiamin diphosphate-binding fold (THDP-binding)
Family: Pyruvate oxidase and decarboxylase Pyr module
Protein: Benzoylformate decarboxylase
Species: Pseudomonas putida
Species SCOP sunid: 88732

 Set description
Number of entries: 20
SCOP Entries: d1mczb2 d1pi3a2 d1mczo2 d1mczj2 d1mcze2 d1mczm2 d1mczp2 d1mczh2 d1mczl2 d1mczc2 d1po7a2 d1mczk2 d1mczf2 d1mczn2 d1mcza2 d1mczi2 d1q6za2 d1mczd2 d1bfd_2 d1mczg2
Alignment File: 88732.alig
Aligned Sequences: 88732_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88732_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 179)]
Uniprot Nr[(2, 181)]
Superposition88732_superp_1.pdb.gz
Rasmol Script88732_superp_1.rsm
View in Jmol