STRuster

 STRuster results: 88718

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Flavodoxin-like
Superfamily: Cobalamin (vitamin B12)-binding domain
Family: Cobalamin (vitamin B12)-binding domain
Protein: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
Species: Propionibacterium freudenreichii, subsp. shermanii
Species SCOP sunid: 88718

 Set description
Number of entries: 15
SCOP Entries: d1e1ca2 d2reqa2 d7reqc2 d1reqa2 d5reqa2 d4reqa2 d7reqa2 d6reqc2 d1reqc2 d5reqc2 d4reqc2 d1e1cc2 d2reqc2 d3reqa2 d6reqa2
Alignment File: 88718.alig
Aligned Sequences: 88718_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88718_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(12, 13)]
Uniprot Nr [(572, 573)]

 Invariant Regions
Region1
Alignment Nr[(0, 11), (14, 167)]
Uniprot Nr[(560, 571), (574, 727)]
Superposition88718_superp_1.pdb.gz
Rasmol Script88718_superp_1.rsm
View in Jmol