STRuster

 STRuster results: 88712

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Cobalamin (vitamin B12)-dependent enzymes
Family: Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain
Protein: Methylmalonyl-CoA mutase beta subunit, domain 1
Species: Propionibacterium freudenreichii, subsp. shermanii
Species SCOP sunid: 88712

 Set description
Number of entries: 15
SCOP Entries: d4reqb1 d1e1cb1 d2reqb1 d3reqb1 d6reqb1 d1reqb1 d5reqb1 d4reqd1 d1reqd1 d7reqd1 d5reqd1 d6reqd1 d7reqb1 d1e1cd1 d2reqd1
Alignment File: 88712.alig
Aligned Sequences: 88712_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88712_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2)]
Uniprot Nr [(15, 17)]

 Invariant Regions
Region1
Alignment Nr[(3, 459)]
Uniprot Nr[(18, 474)]
Superposition88712_superp_1.pdb.gz
Rasmol Script88712_superp_1.rsm
View in Jmol