STRuster

 STRuster results: 88673

 SCOP 1.71 classification
Class: All beta proteins
Fold: Domain of alpha and beta subunits of F1 ATP synthase-like
Superfamily: N-terminal domain of alpha and beta subunits of F1 ATP synthase
Family: N-terminal domain of alpha and beta subunits of F1 ATP synthase
Protein: F1 ATP synthase alpha subunit, domain 1
Species: Cow (Bos taurus)
Species SCOP sunid: 88673

 Set description
Number of entries: 33
SCOP Entries: d1w0jc2 d1w0kc2 d1ohhc2 d1h8ha2 d1e1rb2 d1e1qa2 d1cowb2 d1efra2 d1e79c2 d1e1ra2 d1w0ja2 d1efrb2 d1h8hc2 d1e1qc2 d1w0jb2 d1ohhb2 d1h8ec2 d1e1rc2 d1nbmc2 d1e79b2 d1ohha2 d1e79a2 d1w0kb2 d1h8ea2 d1e1qb2 d1nbma2 d1cowc2 d1w0ka2 d1h8eb2 d1nbmb2 d1efrc2 d1h8hb2 d1cowa2
Alignment File: 88673.alig
Aligned Sequences: 88673_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88673_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (74, 75)]
Uniprot Nr [(62, 66), (136, 137)]

 Invariant Regions
Region1
Alignment Nr[(5, 73)]
Uniprot Nr[(67, 135)]
Superposition88673_superp_1.pdb.gz
Rasmol Script88673_superp_1.rsm
View in Jmol