STRuster

 STRuster results: 88664

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family: Sigma3 domain
Protein: Sigma factor SigA
Species: Thermus aquaticus
Species SCOP sunid: 88664

 Set description
Number of entries: 2
SCOP Entries: d1ku2a1 d1ku2b1
Alignment File: 88664.alig
Aligned Sequences: 88664_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 88664_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 59)]
Uniprot Nr[(273, 332)]
Superposition88664_superp_1.pdb.gz
Rasmol Script88664_superp_1.rsm
View in Jmol