STRuster

 STRuster results: 88662

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family: Sigma3 domain
Protein: Sigma70
Species: Thermus thermophilus
Species SCOP sunid: 88662

 Set description
Number of entries: 4
SCOP Entries: d1smyf1 d1smyp1 d1iw7f1 d1iw7p1
Alignment File: 88662.alig
Aligned Sequences: 88662_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88662_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 60)]
Uniprot Nr[(258, 318)]
Superposition88662_superp_1.pdb.gz
Rasmol Script88662_superp_1.rsm
View in Jmol