| STRuster results: 88621 |
| SCOP 1.71 classification |
| Class: | All beta proteins |
| Fold: | Immunoglobulin-like beta-sandwich |
| Superfamily: | Immunoglobulin |
| Family: | C1 set domains (antibody constant domain-like) |
| Protein: | Class II MHC alpha chain, C-terminal domain |
| Species: | Human (Homo sapiens), HLA-DR group |
| Species SCOP sunid: | 88621 |
| Set description |
| Number of entries: | 35 |
| SCOP Entries: | d1t5wd1 d1d5ma1 d1bx2d1 d1bx2a1 d1r5ia1 d1kg0a1 d1jwsa1 d1sjea1 d1j8ha1 d1lo5a1 d1t5xa1 d1seba1 d1jwma1 d1hxya1 d1hqra1 d1h15a1 d1jwua1 d2seba1 d1klga1 d1klua1 d1h15d1 d1aqda1 d1r5ie1 d1fyta1 d1aqdd1 d1aqdg1 d1d5za1 d1sebe1 d1d6ea1 d1d5xa1 d1t5wa1 d1sjha1 d1pywa1 d1aqdj1 d1a6aa1 |
| Alignment File: | 88621.alig |
| Aligned Sequences: | 88621_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 88621_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(98, 100)] |
| Uniprot Nr | [(205, 207)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 97)] |
| Uniprot Nr | [(107, 204)] |
| Superposition | 88621_superp_1.pdb.gz |
| Rasmol Script | 88621_superp_1.rsm |
| View in Jmol | |
