STRuster

 STRuster results: 88617

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: C1 set domains (antibody constant domain-like)
Protein: CD1, alpha-3 domain
Species: Human (Homo sapiens), CD1b
Species SCOP sunid: 88617

 Set description
Number of entries: 3
SCOP Entries: d1gzpa1 d1uqsa1 d1gzqa1
Alignment File: 88617.alig
Aligned Sequences: 88617_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88617_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 15), (43, 44), (94, 99)]
Uniprot Nr [(202, 217), (245, 246), (296, 301)]

 Invariant Regions
Region1
Alignment Nr[(16, 42), (45, 93)]
Uniprot Nr[(218, 244), (247, 295)]
Superposition88617_superp_1.pdb.gz
Rasmol Script88617_superp_1.rsm
View in Jmol