STRuster

 STRuster results: 88558

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: V set domains (antibody variable domain-like)
Protein: Immunoglobulin heavy chain variable domain, VH
Species: Mouse (Mus musculus), cluster 7.2
Species SCOP sunid: 88558

 Set description
Number of entries: 7
SCOP Entries: d1j1oh_ d1ic5h_ d1c08b_ d1ic7h_ d1j1xh_ d1j1ph_ d1ic4h_
Alignment File: 88558.alig
Aligned Sequences: 88558_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 88558_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(29, 30)]
Uniprot Nr [(30, 31)]

 Invariant Regions
Region1
Alignment Nr[(0, 28), (31, 113)]
Uniprot Nr[(1, 29), (32, 113)]
Superposition88558_superp_1.pdb.gz
Rasmol Script88558_superp_1.rsm
View in Jmol