STRuster

 STRuster results: 82918

 SCOP 1.71 classification
Class: Small proteins
Fold: Glucocorticoid receptor-like (DNA-binding domain)
Superfamily: Glucocorticoid receptor-like (DNA-binding domain)
Family: C-terminal, Zn-finger domain of MutM-like DNA repair proteins
Protein: Endonuclease VIII
Species: Escherichia coli
Species SCOP sunid: 82918

 Set description
Number of entries: 5
SCOP Entries: d1q3ca3 d1k3xa3 d1q3ba3 d1k3wa3 d1q39a3
Alignment File: 82918.alig
Aligned Sequences: 82918_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82918_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (30, 33)]
Uniprot Nr [(217, 223), (247, 250)]

 Invariant Regions
Region1
Alignment Nr[(7, 29), (34, 45)]
Uniprot Nr[(224, 246), (251, 262)]
Superposition82918_superp_1.pdb.gz
Rasmol Script82918_superp_1.rsm
View in Jmol