| STRuster results: 82890 |
| SCOP 1.71 classification |
| Class: | Small proteins |
| Fold: | Knottins (small inhibitors, toxins, lectins) |
| Superfamily: | Growth factor receptor domain |
| Family: | Growth factor receptor domain |
| Protein: | Protooncoprotein Her2 extracellular domain |
| Species: | Human (Homo sapiens) |
| Species SCOP sunid: | 82890 |
| Set description |
| Number of entries: | 6 |
| SCOP Entries: | d1s78a3 d1n8zc3 d1s78b4 d1s78b3 d1s78a4 d1n8zc4 |
| Alignment File: | 82890.alig |
| Aligned Sequences: | 82890_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 82890_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(11, 12), (86, 94), (131, 143), (383, 384), (409, 411)] |
| Uniprot Nr | [(199, 200), (274, 282), (319, 331), (571, 572), (597, 599)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 10), (13, 85), (385, 408), (412, 441)] |
| Uniprot Nr | [(188, 198), (201, 273), (573, 596), (600, 629)] |
| Superposition | - |
| Region | 2 |
| Alignment Nr | [(13, 85), (95, 130), (385, 408), (412, 441)] |
| Uniprot Nr | [(201, 273), (283, 318), (573, 596), (600, 629)] |
| Superposition | - |
| Region | 3 |
| Alignment Nr | [(95, 130), (144, 382), (385, 408), (412, 441)] |
| Uniprot Nr | [(283, 318), (332, 570), (573, 596), (600, 629)] |
| Superposition | - |
