STRuster

 STRuster results: 82696

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Family: Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Protein: Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Species: Escherichia coli
Species SCOP sunid: 82696

 Set description
Number of entries: 24
SCOP Entries: d1oy9a2 d1oy9a3 d1oy9a1 d1oy9a4 d1oyea4 d1oyea3 d1oyda3 d1oy6a4 d1oyea2 d1oy8a4 d1oy8a3 d1oy8a2 d1iwga2 d1iwga4 d1iwga3 d1oyda2 d1oyda1 d1oyda4 d1oyea1 d1iwga1 d1oy6a1 d1oy6a2 d1oy6a3 d1oy8a1
Alignment File: 82696.alig
Aligned Sequences: 82696_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82696_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(266, 271), (619, 620)]
Uniprot Nr [(304, 309), (657, 658)]

 Invariant Regions
Region1
Alignment Nr[(0, 265), (272, 618), (621, 821)]
Uniprot Nr[(38, 303), (310, 656), (659, 859)]
Superposition-