STRuster

 STRuster results: 82542

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Trehalose-6-phosphate synthase, OtsA
Protein: Trehalose-6-phosphate synthase, OtsA
Species: Escherichia coli
Species SCOP sunid: 82542

 Set description
Number of entries: 8
SCOP Entries: d1gz5c_ d1uqta_ d1uqub_ d1uqtb_ d1gz5b_ d1uqua_ d1gz5a_ d1gz5d_
Alignment File: 82542.alig
Aligned Sequences: 82542_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82542_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 23), (41, 45), (60, 61), (204, 207), (302, 304)]
Uniprot Nr [(1, 24), (42, 46), (61, 62), (205, 208), (303, 305)]

 Invariant Regions
Region1
Alignment Nr[(62, 203), (208, 301), (305, 459)]
Uniprot Nr[(63, 204), (209, 302), (306, 456)]
Superposition82542_superp_1.pdb.gz
Rasmol Script82542_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(24, 40), (46, 59)]
Uniprot Nr[(25, 41), (47, 60)]
Superposition82542_superp_2.pdb.gz
Rasmol Script82542_superp_2.rsm
View in Jmol
 
Region3
Alignment Nr[(46, 59), (62, 203)]
Uniprot Nr[(47, 60), (63, 204)]
Superposition82542_superp_3.pdb.gz
Rasmol Script82542_superp_3.rsm
View in Jmol