STRuster

 STRuster results: 82289

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: NAD(P)-binding Rossmann-fold domains
Superfamily: NAD(P)-binding Rossmann-fold domains
Family: Tyrosine-dependent oxidoreductases
Protein: GDP-mannose 4,6-dehydratase
Species: Thale-cress (Arabidopsis thaliana)
Species SCOP sunid: 82289

 Set description
Number of entries: 6
SCOP Entries: d1n7ha_ d1n7gb_ d1n7hb_ d1n7ga_ d1n7gd_ d1n7gc_
Alignment File: 82289.alig
Aligned Sequences: 82289_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82289_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(45, 47)]
Uniprot Nr [(73, 75)]

 Invariant Regions
Region1
Alignment Nr[(0, 44), (48, 340)]
Uniprot Nr[(28, 72), (76, 368)]
Superposition82289_superp_1.pdb.gz
Rasmol Script82289_superp_1.rsm
View in Jmol