STRuster

 STRuster results: 82168

 SCOP 1.71 classification
Class: All beta proteins
Fold: 7-bladed beta-propeller
Superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
Family: YVTN repeat
Protein: Surface layer protein
Species: Archaeon Methanosarcina mazei
Species SCOP sunid: 82168

 Set description
Number of entries: 4
SCOP Entries: d1l0qd2 d1l0qa2 d1l0qb2 d1l0qc2
Alignment File: 82168.alig
Aligned Sequences: 82168_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82168_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(223, 224)]
Uniprot Nr [(263, 264)]

 Invariant Regions
Region1
Alignment Nr[(0, 222), (225, 305)]
Uniprot Nr[(43, 262), (265, 343)]
Superposition82168_superp_1.pdb.gz
Rasmol Script82168_superp_1.rsm
View in Jmol