STRuster

 STRuster results: 82129

 SCOP 1.71 classification
Class: All beta proteins
Fold: Trypsin-like serine proteases
Superfamily: Trypsin-like serine proteases
Family: Viral proteases
Protein: NSP4 proteinase
Species: Equine arteritis virus, EAV
Species SCOP sunid: 82129

 Set description
Number of entries: 4
SCOP Entries: d1mbmd_ d1mbmb_ d1mbma_ d1mbmc_
Alignment File: 82129.alig
Aligned Sequences: 82129_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82129_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(131, 132), (167, 169), (190, 197)]
Uniprot Nr [(1202, 1203), (1238, 1240), (1261, 1268)]

 Invariant Regions
Region1
Alignment Nr[(0, 130), (133, 166), (170, 189)]
Uniprot Nr[(1071, 1201), (1204, 1237), (1241, 1260)]
Superposition82129_superp_1.pdb.gz
Rasmol Script82129_superp_1.rsm
View in Jmol