STRuster

 STRuster results: 82101

 SCOP 1.71 classification
Class: All beta proteins
Fold: OB-fold
Superfamily: Nucleic acid-binding proteins
Family: Single strand DNA-binding domain, SSB
Protein: OB-fold domains of BRCA2
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 82101

 Set description
Number of entries: 6
SCOP Entries: d1iyjb4 d1iyjb5 d1iyjb3 d1iyjd3 d1iyjd4 d1iyjd5
Alignment File: 82101.alig
Aligned Sequences: 82101_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82101_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(11, 12), (25, 27), (90, 93), (120, 142), (339, 342), (370, 372), (494, 498)]
Uniprot Nr [(2610, 2611), (2624, 2626), (2689, 2692), (2719, 2741), (2938, 2941), (2969, 2971), (3093, 3097)]

 Invariant Regions
Region1
Alignment Nr[(0, 10), (13, 24), (28, 89), (94, 119), (143, 338), (373, 493), (499, 518)]
Uniprot Nr[(2599, 2609), (2612, 2623), (2627, 2688), (2693, 2718), (2742, 2937), (2972, 3092), (3098, 3117)]
Superposition-