STRuster

 STRuster results: 82000

 SCOP 1.71 classification
Class: All beta proteins
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: beta-sandwich domain of Sec23/24
Family: beta-sandwich domain of Sec23/24
Protein: Sec24
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 82000

 Set description
Number of entries: 4
SCOP Entries: d1pcxa2 d1m2vb2 d1pd1a2 d1pd0a2
Alignment File: 82000.alig
Aligned Sequences: 82000_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 82000_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(458, 460), (481, 482)]
Uniprot Nr [(578, 580), (601, 602)]

 Invariant Regions
Region1
Alignment Nr[(0, 457), (461, 480), (483, 526)]
Uniprot Nr[(120, 577), (581, 600), (603, 646)]
Superposition82000_superp_1.pdb.gz
Rasmol Script82000_superp_1.rsm
View in Jmol