STRuster

 STRuster results: 81889

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Helical scaffold and wing domains of SecA
Superfamily: Helical scaffold and wing domains of SecA
Family: Helical scaffold and wing domains of SecA
Protein: Helical scaffold and wing domains of SecA
Species: Bacillus subtilis
Species SCOP sunid: 81889

 Set description
Number of entries: 4
SCOP Entries: d1m74a2 d1tf5a2 d1m6na2 d1tf2a2
Alignment File: 81889.alig
Aligned Sequences: 81889_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81889_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 51), (70, 106), (128, 142), (153, 169), (206, 213)]
Uniprot Nr [(571, 622), (641, 677), (699, 713), (724, 740), (777, 784)]

 Invariant Regions
Region1
Alignment Nr[(52, 69), (107, 127), (143, 152), (214, 231)]
Uniprot Nr[(623, 640), (678, 698), (714, 723), (785, 802)]
Superposition81889_superp_1.pdb.gz
Rasmol Script81889_superp_1.rsm
View in Jmol