STRuster

 STRuster results: 81876

 SCOP 1.71 classification
Class: All alpha proteins
Fold: BRCA2 helical domain
Superfamily: BRCA2 helical domain
Family: BRCA2 helical domain
Protein: BRCA2 helical domain
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 81876

 Set description
Number of entries: 2
SCOP Entries: d1iyjb1 d1iyjd1
Alignment File: 81876.alig
Aligned Sequences: 81876_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 81876_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 14), (27, 28), (55, 68), (86, 107), (119, 120), (168, 169)]
Uniprot Nr [(2403, 2417), (2430, 2431), (2458, 2471), (2489, 2510), (2522, 2523), (2571, 2572)]

 Invariant Regions
Region1
Alignment Nr[(15, 26), (29, 54), (69, 85), (108, 118), (121, 167), (170, 195)]
Uniprot Nr[(2418, 2429), (2432, 2457), (2472, 2488), (2511, 2521), (2524, 2570), (2573, 2598)]
Superposition81876_superp_1.pdb.gz
Rasmol Script81876_superp_1.rsm
View in Jmol