STRuster

 STRuster results: 81808

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Saposin-like
Superfamily: Saposin
Family: Saposin B
Protein: Saposin B
Species: Human (Homo sapiens)
Species SCOP sunid: 81808

 Set description
Number of entries: 3
SCOP Entries: d1n69c_ d1n69a_ d1n69b_
Alignment File: 81808.alig
Aligned Sequences: 81808_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81808_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 29), (42, 62)]
Uniprot Nr [(193, 222), (235, 255)]

 Invariant Regions
Region1
Alignment Nr[(30, 41)]
Uniprot Nr[(223, 234)]
Superposition81808_superp_1.pdb.gz
Rasmol Script81808_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(63, 79)]
Uniprot Nr[(256, 272)]
Superposition81808_superp_2.pdb.gz
Rasmol Script81808_superp_2.rsm
View in Jmol