STRuster

 STRuster results: 81757

 SCOP 1.71 classification
Class: All alpha proteins
Fold: EF Hand-like
Superfamily: EF-hand
Family: Calmodulin-like
Protein: Myosin Light Chain Mlc1p
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 81757

 Set description
Number of entries: 4
SCOP Entries: d1m46a_ d1m45a_ d1n2db_ d1n2da_
Alignment File: 81757.alig
Aligned Sequences: 81757_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81757_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (51, 54), (77, 94), (137, 147)]
Uniprot Nr [(2, 8), (53, 56), (79, 96), (139, 149)]

 Invariant Regions
Region1
Alignment Nr[(7, 50), (55, 76)]
Uniprot Nr[(9, 52), (57, 78)]
Superposition81757_superp_1.pdb.gz
Rasmol Script81757_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(95, 136)]
Uniprot Nr[(97, 138)]
Superposition81757_superp_2.pdb.gz
Rasmol Script81757_superp_2.rsm
View in Jmol