STRuster

 STRuster results: 81643

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Protein: Mitochondrial cytochrome b subunit, C-terminal domain
Species: Cow (Bos taurus)
Species SCOP sunid: 81643

 Set description
Number of entries: 9
SCOP Entries: d1ntmc1 d1ntkc1 d1l0lc1 d1ntzc1 d1nu1c1 d1qcrc2 d1l0nc1 d1sqbc1 d1be3c2
Alignment File: 81643.alig
Aligned Sequences: 81643_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81643_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (22, 23)]
Uniprot Nr [(261, 267), (283, 284)]

 Invariant Regions
Region1
Alignment Nr[(7, 21), (24, 118)]
Uniprot Nr[(268, 282), (285, 379)]
Superposition81643_superp_1.pdb.gz
Rasmol Script81643_superp_1.rsm
View in Jmol