STRuster

 STRuster results: 81638

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Heme-binding four-helical bundle
Superfamily: Transmembrane di-heme cytochromes
Family: Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Protein: Mitochondrial cytochrome b subunit, N-terminal domain
Species: Cow (Bos taurus)
Species SCOP sunid: 81638

 Set description
Number of entries: 9
SCOP Entries: d1ntmc2 d1ntkc2 d1be3c3 d1l0lc2 d1nu1c2 d1qcrc3 d1l0nc2 d1ntzc2 d1sqbc2
Alignment File: 81638.alig
Aligned Sequences: 81638_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81638_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 15), (61, 72), (135, 152), (201, 202), (248, 259)]
Uniprot Nr [(1, 16), (62, 73), (136, 153), (202, 203), (249, 260)]

 Invariant Regions
Region1
Alignment Nr[(16, 60), (73, 134), (153, 200), (203, 247)]
Uniprot Nr[(17, 61), (74, 135), (154, 201), (204, 248)]
Superposition81638_superp_1.pdb.gz
Rasmol Script81638_superp_1.rsm
View in Jmol