STRuster

 STRuster results: 81485

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Single transmembrane helix
Superfamily: Photosystem II reaction centre subunit H, transmembrane region
Family: Photosystem II reaction centre subunit H, transmembrane region
Protein: Photosystem II reaction centre subunit H, transmembrane region
Species: Rhodopseudomonas viridis
Species SCOP sunid: 81485

 Set description
Number of entries: 8
SCOP Entries: d3prch2 d6prch2 d5prch2 d4prch2 d1dxrh2 d1r2ch2 d2prch2 d7prch2
Alignment File: 81485.alig
Aligned Sequences: 81485_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81485_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 7)]
Uniprot Nr [(1, 8)]

 Invariant Regions
Region1
Alignment Nr[(8, 35)]
Uniprot Nr[(9, 36)]
Superposition81485_superp_1.pdb.gz
Rasmol Script81485_superp_1.rsm
View in Jmol