STRuster

 STRuster results: 81478

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Bacterial photosystem II reaction centre, L and M subunits
Superfamily: Bacterial photosystem II reaction centre, L and M subunits
Family: Bacterial photosystem II reaction centre, L and M subunits
Protein: M (medium) subunit
Species: Rhodopseudomonas viridis
Species SCOP sunid: 81478

 Set description
Number of entries: 8
SCOP Entries: d6prcm_ d5prcm_ d4prcm_ d1r2cm_ d1dxrm_ d2prcm_ d3prcm_ d7prcm_
Alignment File: 81478.alig
Aligned Sequences: 81478_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81478_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 322)]
Uniprot Nr[(1, 323)]
Superposition81478_superp_1.pdb.gz
Rasmol Script81478_superp_1.rsm
View in Jmol