STRuster

 STRuster results: 81475

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Bacterial photosystem II reaction centre, L and M subunits
Superfamily: Bacterial photosystem II reaction centre, L and M subunits
Family: Bacterial photosystem II reaction centre, L and M subunits
Protein: L (light) subunit
Species: Rhodobacter sphaeroides
Species SCOP sunid: 81475

 Set description
Number of entries: 42
SCOP Entries: d1rzzl_ d1l9jr_ d1rg5l_ d1rzhl_ d1rqkl_ d1pcrl_ d1fnql_ d1umxl_ d1dv6r_ d1jgxl_ d1rgnl_ d1qovl_ d1aijr_ d1rzzr_ d1k6nl_ d1s00r_ d1jgwl_ d1ogvl_ d1kbyl_ d1dv6l_ d1aign_ d1f6nl_ d1s00l_ d1mpsl_ d1aijl_ d1jgyl_ d1dv3l_ d1jh0l_ d1m3xl_ d1e6dl_ d1jgzl_ d1e14l_ d1k6ll_ d1ds8l_ d1aigl_ d1dv3r_ d1l9jl_ d1fnpl_ d1ds8r_ d1rvjl_ d1ry5l_ d1l9bl_
Alignment File: 81475.alig
Aligned Sequences: 81475_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 81475_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 280)]
Uniprot Nr[(1, 281)]
Superposition81475_superp_1.pdb.gz
Rasmol Script81475_superp_1.rsm
View in Jmol